1994/1995 COMMITTEE MEMBERS
Mr Arnold Kabral, Mr Peter McCardle,
Mr Graeme Morrison, Mr Lyndsay Peters
1996 COMMITTEE MEMBERS
Ms Kerryn Weekes, Ms Deborah Shapira, Mr Peter Hobson
CONTENTS
Flow Cytometer Quality Control
Appendix 1: Determination of Reference Ranges
Appendix 2: Cell Freezing and Thawing
Appendix 3: Gating Control
Appendix 4
These recommendations are presented
with a view to being a minimum standard. These recommendations
should not be seen to restrict the ability of any individual.
This document will be reviewed regularly to ensure that these
recommendations embrace currently accepted laboratory practices.
Determination of the tissue antigen
HLA-B27 is important because of the strong association with ankylosing
spondylitis, a chronic inflammatory disease affecting the axial
musculo-skeletal system.
Traditionally, it has been the lymphocytotoxicity
assay that was used to determine HLA status1. The development
of monoclonal antibodies to HLA antigens has rendered flow cytometry
a proficient alternative procedure. As with the lymphocytotoxicity
assay, peripheral blood lymphocytes are used as the marker population.
In this respect flow cytometry procedures for HLA status will
generally follow the lymphocyte subset immunophenotyping procedure.
The advent of monoclonal antibodies
to the HLA-B27 antigen led the way for a flow cytometric method2.
The early clones suffered because of their cross-reactivity with
other HLA antigens, especially HLA-B7. False positives result
when homozygous B7 expression occurs, and this allelic configuration
has a population frequency of approximately 6%. HLA-B27 is expressed
in about 9% of the Caucasian population.
Problems may arise, however, when antibody
cross-reactivity occurs between different HLA antigens. Combating
this requires the use of either monospecific antibodies or procedures
which block the expression of irrelevant antigen3.
The cytotoxicity assay may also be utilised as a confirmation
of positive antigen expression.
HLA-B27 typing by flow cytometry is
performed as a lysed whole blood technique using a single colour,
directly conjugated antibody and gated peripheral blood lymphocytes
as the marker population.
Each laboratory will adopt internal
procedures and policies for the safe handling of biological specimens.
1. Use universal precautions4
with all specimens.
2. Develop appropriate internal procedures
to cope with accidents such as spillage.
3. Handle and manipulate specimens in
a safe biological confinement area wherever possible.
4. Fix cell samples with a 0.5% available
formaldehyde-based solution for 15 mins before leaving a safe
biological confinement area.
5. Final cell suspension should be in
a 0.5% 1% available reactive formaldehyde-based solution.
6. Unfixed samples outside the safe
handling area should be capped.
7. Appropriate safety devices such as
gloves, gowns, goggles, centrifuge carriers, automatic pipetting
are recommended whenever handling and processing specimens. Use
disposable plastic equipment wherever possible.
8. Wash hands with medicated soap after
working with specimens, removing gloves, or when leaving the laboratory,
and as in accordance with usual local laboratory policy and universal
precautions.
9. For decontamination of flow cytometers
refer to the instrument manufacturers' recommended procedures.
10. Liquid waste should be treated with
sodium hypochlorite. Solid waste should be handled carefully in
appropriate robust containers.
11. Laser safety: Most benchtop flow
cytometers use visible lasers which pose very little risk of injury
to the operator. Operators should be aware of the potential dangers
of lasers and the need for safety devices such as shields and
goggles in given circumstances. The operator is referred to the
manufacturer of the instrument and to AS 22111 with
regard to safety of lasers.
1. Universal precautions4
should be strictly observed when collecting blood samples.
2. Each specimen should be labelled
with the patient name or a unique patient identifier, and date
and time of collection. If a preprinted label is used, the signature
or initials of the collector should appear on the label to verify
that the information relates to the patient from whom the blood
was collected.
3. Each specimen should be accompanied
by a test requisition which should include the patient name or
unique patient identifier, date and time of collection, age,
sex, pertinent medication and presumptive diagnosis of the patient,
name of requesting physician, and address for return of results.
4. The request form and specimen tube(s)
should carry identical patient information. Both should be checked
on receipt in the laboratory and in case of discrepancy or doubt,
a clear, documented protocol approved by the Director/Scientist
in Charge of the laboratory should be followed. Unlabelled samples
and forms should be discarded.
5. A total white cell count should be
performed at the laboratory initiating the request. For distant
laboratories and dispatch centres a white cell count and unstained
blood film should accompany each specimen.
6. Heparin or ACD anticoagulated specimens
may be processed immediately or up to 48 hours after collection.
7. Any specimen more than 72 hours old,
or unlabelled, or incorrectly labelled or short collection should
be re-collected.
8. Frozen whole blood or gradient separated
peripheral blood mononuclear cells (PBMC) may also be used.
1. Packaging, labelling, and transport
of specimens should comply with all current local, state, national,
and international regulations for the regions through which the
specimens will pass.
2. Specimens should be maintained at
18o 22oC in a light proof container.
3. Temperatures below 10oC
or above 37oC must be avoided.
1. Visually inspect the specimen for
clots, haemolysis, or container defects. Re-collect the sample if
the specimen shows any visual signs of deterioration.
2. Specimens which have been collected
inappropriately may be processed by the laboratory according to
a local approved, documented policy. The deficiencies in the sample
should be noted and the report should reflect the effect that
these deficiencies may have on the results.
1. Whole blood lysis of red cells is
recommended for routine analysis. Most methods of HLA-B27 analysis5-11
employ either a single colour direct immunofluorescence or a second
colour conjugated to the T-cell marker CD3 in a dual assay on
a gated lymphocyte population (see Appendix 1 for lymphocyte gating).
2. Several lysing techniques are available12.
These include water, ammonium chloride, and hypotonic buffer. For commercial
reagents, the manufacturer's recommended protocol
should always be followed unless data are available confirming
that any modifications do not adversely affect results. It is
important to note that valid results will also be obtained from
gradient density separated PBMC. These cells can be stored in
frozen aliquots and either be used as controls or tested at a
later date (see Appendix 2).
3. Where possible, a full blood count
and differential must be performed before processing. If this
is not possible, each laboratory must have a procedure to identify
specimens with abnormal leucocyte counts and correct for any associated
artefacts. Specimens with pronounced leucocytopaenia may have
insufficient cells for flow cytometric analysis, thus requiring
a larger volume of sample or a buffy coat preparation. Conversely,
normal concentrations of antibody reagents may be insufficient
to saturate all binding sites in specimens with leucocytosis,
leading to possible false negative results. Samples with leucocytosis
need to be diluted before testing.
4. For each lot of given reagent, the
laboratory should verify that the manufacturer's recommended amount
of antibody gives optimal positive/negative resolution and optimal
positive staining intensity with the laboratory's method of sample
preparation. For any deviation from the manufacturer's recommended
staining conditions (e.g. time, volume, temperature, or cell number),
the laboratory must determine the minimum amount (volume and/or
weight) of reagent required to give optimal positive/negative
resolution and optimal positive staining intensity.
This is best done by using the following
HLA typed control samples: HLA-B7, HLA-B27 negative, HLAB27
positive, and an HLA-B7 positive. Control samples need not be collected
fresh on the day – they can be stored as frozen whole blood aliquots
from suitable donors. If liquid nitrogen is unavailable, frozen
aliquots may be kept at –80oC (see Appendix 2).
Any deviation from the protocol should
be documented in a laboratory protocol book to give results comparable
to those obtained using the recommended procedure.
The machine protocol for typing HLA-B27
should then be checked for every new batch of antibody and after
every service using these typed controls.
5. For HLA B27 typing, a putative positive
result requires confirmation if the primary antibody is known
to cross-react with other antigens. To do this one may:
(i) re-assay in the presence of blocking antibody3 OR
(ii) re-assay using a monospecific monoclonal antibody5 OR
(iii) re-assay using the lymphocytotoxicity method1 OR
(iv) reassay using polymerase chain reaction techniques13 OR
(v) re-assay with anti-HLA-B7 conjugate
to a second colour6.
FLOW CYTOMETER QUALITY CONTROL
These procedures should be carried out
when the flow cytometer is first received, or when major maintenance
or repair is performed.
1. Alignment of the optical components
of the flow cytometer (laser, focusing lenses, collecting lenses,
photodetectors, etc) should be performed according to the manufacturer's
recommended alignment procedures. These procedures should use
the recommended alignment particles, which are typically uniform
plastic particles incorporating a fluorescent dye (other materials
may be recommended by the manufacturer). The laboratory must determine
optimum settings for their own instrument / alignment particle
combination and establish their own expected values. The expected
range along with relevant instrument settings should be recorded
in an instrument log book for subsequent use and daily monitoring
(see Appendix 3, Optical Alignment Log).
Optical alignment can be verified by:
1.1 Running alignment particles at instrument
settings determined at the time of initial instrument set-up.
1.2 Recording the mean channel number
and coefficient of variation (CV) for all parameters that will
be analysed for test specimens in the daily log book and/or on
LevyJennings plots (Optical Alignment Log).
2. Verification of instrument sensitivity
and spectral overlap compensation settings should be determined
and recorded using cells or fluorescent microparticles.
2.1 Instrument sensitivity is verified
by:
(1) Using freshly stained lymphocytes,
establishing that positivenegative separations are acceptable.
(2) If sensitivity particles (eg. fluorochromelabelled
beads or nuclei) are used, run them at testspecific settings
established at the time of initial setup.
(3) Record mean fluorescence channel
and CV for all populations of interest (e.g. unstained versus
dimly stained) in the daily log book and/or on LevyJennings
plots (Sensitivity Log).
2.2 Two colour compensation is verified
by:
(1) Freshly stained cells using mutually
exclusive antibodies e.g. CD3-FITC and CD19-PE for lymphocytes.
(2) If compensation particles (e.g. FITC-
and PElabelled beads) are used, run them at testspecific
settings and compensation levels established at time of initial
instrument set-up.
(3) Record mean channel fluorescence
intensity for each population of interest (red only, green only,
and negative for both) in the daily log book and/or on LevyJennings
plots (Compensation Log).
If particles' values are not within acceptable range, compensation
settings should be reevaluated using antibodystained leucocytes.
Note: Overcompensation leads to
fewer errors than undercompensation.
Figure 1
Overall system performance can be verified
by:
(1) Running a "normal" specimen
stained with an antibody reagent such as antiCD3 FITC and
CD4 PE at testspecific instrument settings.
(2) Verifying acceptable light scatter
resolution of the leucocyte populations.
(A) (B)
Representation of application of correct
compensation. Gated correlated display of antiCD3 FITC and
antiCD19 PE. (A) Uncompensated. (B) Correctly compensated
1. Sample order. Run all control specimens
first and then, according to laboratory priority,
run the patient samples.
2. Test order within any panel. The
first tube should be a gating control to maximise the cells of
interest and minimise contamination. The appropriate isotype controls
should be run next, followed by the subsequent test panel
to investigate the provisional diagnosis.
3. Assessment of specimen viability
is desirable; however, because of biohazard concerns, it is recommended
that all samples be appropriately fixed prior to analysis on the
flow cytometer. It is not presently possible, on a routine large-scale
basis, to distinguish those cells which were non viable
prior to fixation. However, this can be performed using ethidium
monoazide (EMA) as described by K. Muirhead, 2nd AFCG Methods Course,
198914.
Definition of a Lymphocyte Gate
Figure 2
Representation of common ways of displaying
correlated low angle versus 90o angle light scatter
seen from lysed whole blood preparations. (L = predominantly lymphocytes,
M = predominantly monocytes, P = predominantly polymorphonuclear
leucocytes).
4. Count at least 2000 gated events in each sample. This number assures with 95% confidence that the result is < 2% of the "true" value (binomial sampling).
NB: This sample mode assumes that the
variability of determining replicates is < 2% SD.
5. The counting of 2000 gated events
to ensure reasonable statistical confidence may not be achievable
in severely leucocytopaenic specimens.
6. Set leucocyte gates as broadly as
possible, consistent with acceptable levels of contamination to
minimise the exclusion of cells of interest.
7. Each laboratory should establish
limits of contaminating cells and debris, based on documentation
that their inclusion does not significantly affect the measurement
of interest. If levels of contamination exceed established laboratory
limits, the corrective actions taken are to adjust light scatter
gates and re-analyse the immunofluorescent correlated two colour
plot.
Typical satisfactory values for lymphocytes
are 90% of all lymphocytes and 85% purity in the gate as determined
by CD45-FITC/CD14-PE gating control (Appendix 3 ).
8. If levels of contamination by non-lymphocytes
cannot be minimised to within acceptable limits, then
test results may be suspect. If this contamination cannot be explained
by reinterpretation of the data, a second specimen should be requested.
9. Most commercially available directly
conjugated reagents give good resolution between low intensity
negative and higher intensity positive cell populations. When
simultaneous two-colour immunofluorescent correlated data are analysed,
boundaries must be set to define four distinct regions: cells
labelled with neither antibody, cells labelled with antibody #1
but not antibody #2, cells labelled with antibody #2 but not #1,
and cells labelled with both antibodies.
1. The possibility of patients' contesting
the diagnostic implications derived in part from flow cytometry
testing makes it incumbent upon the laboratory to be able to demonstrate
and verify the process used in arriving at the reported test results.
2. Ideally listmode data on all samples
analysed should be retained. This allows for the complete re-analysis
of the raw data. At a minimum retain correlated dual fluorescent
data for each test and any interpretive comments.
3. Retain all primary files, worksheets,
and report forms.
4. Minimum duration of data storage
depends on state and federal regulations. These regulations may
vary, and each laboratory will need to remain informed of the current
requirements.
1. Report all unique patient identifiers.
2. Report all data in terms of positive/negative
or equivocal.
3. Report description and results of
confirmatory testing where applicable.
1. Where possible, the laboratory should
belong to and participate in a recognised external Quality Assurance
program such as the RCPA Quality Assurance Programs Pty Ltd, HLA-B27
program.
2. Each laboratory should determine
the level of test variability by preparing and analysing at least
six replicates. This will provide a basis when methodologic changes
are introduced.
1. Terasaki, PI, and McClelland, JD (1964):
Microdroplet assay of human serum cytotoxins. Nature 204:998-1000.
2. Albrecht, J, and Muller, HAG (1987):
HLA-B27 typing by use of flow cytofluorometry. Clin. Chem. 33:1619-623.
3. Trapani, JA, Vaughan, HA, Tait, BD,
McKenzie, IFC (1988): Immunoradiometric assay for the rapid detection
of HLA-27. Immunol. Cell Biol. 66: 215-19.
4. Universal precautions: There appears to be no single document that addresses the specific needs of flow cytometry. Readers are advised to refer to the following documents:
(i) Australian Standard AS2211-1991, Laser Safety.
(ii) Australian Standard AS/NZ 2243.3 - 1995, Safety in laboratories, Part 3: Microbiology.
(iii) NCCLS M29T, Protection of
laboratory workers from infectious disease transmitted by blood,
body fluids and tissue.
5. Pei, R, Ar jomand-Shamsai, M, Deng,
CT, Cesbron, A, Bignon, JD, Lee, JH (1993): A monospecific HLA-B27
fluorescein isothiocyanate-conjugated monoclonal antibody for
rapid, simple and accurate HLA-B27 typing. Tissue Antigens, 41:200-203.
6. Janssen, WCM, Rouwen, JACN, and Hoffman,
JJML (1992): Improved flow cytometric method for HLA-B27 typing.
Ann. Clin. Biochem. 29: 663-669.
7. Zuber, C, Ulrich, G, Monseaux, S,
Cado, S, and Parmentier, S. (1994). Reliable flow cytometry HLA-B27
typing with B27-FITC/B7-PE combination. Cytometry Suppl. 7:77.
8. Orr, K, Thomson, GTD, and Alfa, M.
(1994): Utilization of commercial antisera and flow cytometry
in HLA-B27 typing. Cytometry 18:17-20.
9. Hulstaert, F, Albrecht, J, Hannet,
T, Lancaster, P, Buchner, L, Kunz, A, Falkenrodt, A, Tongio,
M, De Keyser, F, Veys, EM (1994): An optimized method of routine
HLA-B27 screening using flow cytometry. Cytometry 18:21-29.
10. Reynolds, WM, Evans, PR, Lane, AC,
Howell, WM, Wilson, PJ, Wong, R, and Smith, JL (1994): Automated
HLA-B27 testing using the FACS prep/FACScan system. Cytometry
18:109-115.
11. Ward, AR, and Nikaein, A (1995):
Comparison of monoclonal antibodies for flow cytometry analysis
of HLA-B27 antigen. Cytometry 22:65-69.
12. Loken, MR, Meiners, H, Terstappen,
LWM (1988): Comparison of sample preparation techniques for flow cytometric
analysis of immunofluorescence. Cytometry Supplement 2:53.
13. Steffens-Nakken HM, Zwart, G, and
van der Bergh, F (1995): Validation of allele-specific polymerase
chain reaction for DNA typing of HLA-B27. Clin. Chem 41(5):687-692.
14. Muirhead, KA, Wallace, PK, Schmitt,
TC, Rescatore, RL, Ranco, JA, Horan, PK. Methodological considerations
for implementation of lymphocyte subset analysis in a clinical
reference laboratory. In Clinical Cytometry. M. Andreeff,
ed. Ann. N.Y. Acad. Sci. Vol. 468, pp 113127, The New York
Academy of Sciences, New York, NY, 1986.
APPENDIX 1: DETERMINATION OF REFERENCE RANGES
1. Definitions
Reference values: Set of values for
a measured quantity.
Reference range: Classically, the range
of values found in 95% of a reference population of healthy individuals
without overt clinical disease.
NOTE: Age, sex, and race are factors
known to influence reference intervals.
2. Procedure for Determining Reference
Ranges
Statistical methods, both parametric
and nonparametric, and graphical methods are discussed in detail
in references 1-3. Only a brief summary of the steps involved
is presented here.
(1) Collect data on randomly chosen
set of representative individuals (e.g. 50 healthy individuals).
(2) Inspect frequency distribution of
values obtained.
(3) If frequency distribution is Gaussian,
use appropriate statistical techniques to estimate 95% confidence
interval and use endpoints of interval as the reference range.
(4) If frequency distribution is non-Gaussain,
back transform endpoints of 95% confidence interval to obtain
reference range (e.g. log X, of (X+C), square root X, arcsin X)
and proceed as in step 3.
(5) If no satisfactory transformation
can be identified, use non-parametric methods which do not depend
on the exact distribution of the data.
2.2 Nonparametric methods
(1) Collect data on randomly chosen set of representative individuals.
(2) Arrange data in ascending
or descending order.
(3) Use appropriate nonparametric
techniques to identify desired limiting percentiles (e.g. 2.5 and
97.5) to desired confidence level.
Nonparametric methods are most appropriate
when data does not show a Gaussian distribution and cannot be
so transformed. However, they are very sensitive to outliers,
and final ranges chosen may be highly dependent on methods used
for removing outliers (1-3).
3.0 Pitfalls in Determining Flow
Cytometric Reference Ranges
Each laboratory should determine its
own reference range using its particular preparation method and
instrumentation because significant laboratory-to-laboratory differences
related to these variables have been reported.
However, quite large data sets are technically
required to carry the above described methods for reference range
determination, typically >300 for parametric methods and >120
for establishing nonparametric intervals with 90% confidence.
Until more standardised methodology allows pooling of data among
laboratories (hence this document), this is clearly an unrealistic
expectation.
Other confounding variables besides
sample size have been described (4-5).
One practical solution to the dilemma
is to accumulate and analyse reference data in smaller sets (eg.
10-20 individuals), which can then also be pooled and analysed.
If the last two sets of pooled data are found to give the same
reference range within experimental error, this gives increased
confidence that the reference range selected is not unduly affected
by the small sample size.
REFERENCES TO APPENDIX 1
1. Winkel, P, and Statlan, BE. Reference
values. In Clinical Diagnosis and Management by Laboratory Methods
(ed. J B Henry), Philadelphia, WB Saunders Co, 1979, pp 19-52.
2. Martin, HF, Gudzinowicz, BJ, Fanger,
H. Normal Values in Clinical Chemistry. New York, Marcel Dekker,
1975, pp 102-236.
3. Henry, RJ, Cannon, DC, Winkelman,
JW. Clinical Chemistry Principles and Technics. New York, Harper
and Row, 1974, pp 102-236.
4. McCarthy, RC, and Fetterhoff, TJ. Issues in Quality Assurance in Clinical Flow Cytometry. Arch. Pathol. Lab. Med. 113:658-666, 1989 (in press).
APPENDIX 2: CELL FREEZING AND THAWING
REAGENTS
1. Blood cells: These may be density
gradient separated peripheral blood mononuclear cells (PBMC),
PBMC from buffy coats, or transformed B-cell lines. This method
may not be suitable for whole blood techniques.
2. Cell culture medium: 20-50% foetal
calf serum in RPMI or other balanced salt solution. This should
be cooled for freezing, warmed for thawing.
3. Freeze mix: Dimethyl sulphoxide (DMSO)
at 20% in cell culture mediium.
4. Cryotubes: Prelabelled and chilled
if possible.
PROCEDURE
NOTE:
All preparation should be carried out on ice as DMSO is toxic
to cells at room temperature.
1. Count PBMC.
2. Gently centrifuge cells and resuspend in cell culture medium at 107 per ml.
3. Place cells in a small beaker on ice and slowly add to the centrifuge tube an equivalent volume of pre-cooled freeze mix, mixing well.
4. Pipette 1 mL aliquots into cryotubes.
5. As quickly as possible place tubes in an insulated container into –70oC overnight. Cells may be stored at this temperature for many months if liquid nitrogen storage is unavailable.
6. Thaw cells as quickly as possible by warming the cryotube in a 37oC water bath.
7. Pipette into a centrifuge tube containing pre-warmed cell culture medium or equivalent and centrifuge as before.
8. Reconstitute cell pellet as desired.
An example of a gating control for lymphocytes
where contamination cell types include but are not limited to
the following:
(2) Monocytes (e.g. CD14 positive cells;
potential false negatives or positives).
(3) Monocytes + granulocytes (e.g. CD13
positive cells; potential false negatives or positives).
Figure 1.
Lymphocyte gating utilising CD14 and CD45.
1 = nonleukocytes
2 = polymorphonuclear leukocytes
3 = lymphocytes
4 = monocytes
Lymphocyte gates should be adjusted
to maximise number of cells in region 3 and minimise cells in
regions 1,2, and 4.
Back to standards and regulations
Back to consensus documents and ring trials
CD-ROM Vol 3 was produced by Monica M. Shively and other staff at the Purdue University Cytometry Laboratories and distributed free of charge as an educational service to the cytometry community. If you have any comments please direct them to Dr. J. Paul Robinson, Professor & Director, PUCL, Purdue University, West Lafayette, IN 47907. Phone:(765) 494-0757; FAX (765) 494-0517; Web http://www.cyto.purdue.edu, EMAIL cdrom3@flowcyt.cyto.purdue.edu